Tools Highlight


This page is meant to summarize tools, both computational or experimental, that can help on the day by day work to anybody in the planarian field. Your suggestions are welcomed biggrin !!!


Design of specific and efficient
planarian dsRNAs with ERNAi

E-RNAi is a tool for the design and evaluation of RNAi reagents for a variety of species, now including planarian as well. It can be used to design and evaluate long dsRNAs (including esiRNAs) as well as siRNAs. The web interface can process many queries in batch, for up to 50 target sequences in one run.

For specificity calculations, the predicted dsRNAs are blasted against the genomic contigs to minimize off-target effects. The database now includes planarian contigs and MAKER gene predictions from SmedGB(external link).

Sharing Data

Here you can find web-based tools implemented to share data and documents with other people:

  • Google Docs(external link)
    Accessing, editing and sharing documents (presentations, spreadsheets and text documents) through the web.
  • DropBox(external link)
    Synchronizing or sharing data among users and computers (2GB of free space to share data).

Page last modified on Friday 26 of August, 2011 20:55:31 CEST